4 FIBRIN AMYLOID FORMATION: HOW PEROXYNITRITE TRIGGERS MICROCLOTS
THE hidden WAY car emissions CAN KILL YOU.
Traffic pollution invades your home—triggering respiratory distress often mistaken for bad indoor air or asthma, while hidden toxins silently block your body’s smallest blood vessels.
Children are among those particularly vulnerable to traffic-related air pollution.
ATP
ATP is the primary energy molecule used by cells. Nearly all cellular functions — including muscle activity, nerve signaling, and repair processes — depend on ATP availability.
Carbon monoxide (CO)
Carbon monoxide is a gas that binds strongly to hemoglobin and interferes with oxygen transport. Even low-level exposure can reduce oxygen delivery to tissues and increase physiological stress.
Cellular energy production
Cellular energy production refers to the processes cells use to generate ATP. Under normal conditions, this mainly occurs through oxygen-dependent mitochondrial respiration.
Chronic hypoxia
Chronic hypoxia means tissues experience long-term reduced oxygen availability. This can force the body into continuous compensatory stress responses and altered metabolism.
Circulation
Circulation is the movement of blood through the body. It delivers oxygen and nutrients to tissues while removing carbon dioxide and waste products.
Compensatory mechanism
A compensatory mechanism is the body’s attempt to maintain stability during dysfunction or stress. These responses may help temporarily, but chronic compensation can eventually contribute to symptoms.
Dysautonomia
Dysautonomia refers to dysfunction of the autonomic nervous system. It can affect heart rate, blood pressure, circulation, digestion, temperature regulation, and stress responses.
Endothelial dysfunction
Endothelial dysfunction means the inner lining of blood vessels no longer regulates circulation normally. This can impair blood flow control, oxygen delivery, vascular relaxation, and microcirculation.
Endothelium
The endothelium is the thin inner lining of blood vessels. It plays a central role in regulating blood flow, vascular tone, inflammation, and oxygen delivery.
Energy deficit
An energy deficit occurs when cells cannot produce enough ATP to meet demand. This can contribute to fatigue, reduced physical capacity, impaired recovery, and physiological stress.
Glycolysis
Glycolysis is a form of energy production that does not require oxygen. It is less efficient than mitochondrial respiration and produces lactate as a byproduct.
Hypoxia
Hypoxia means insufficient oxygen availability at the tissue level. Even when blood oxygen appears normal, impaired circulation can still create localized hypoxia.
Insulin resistance
Insulin resistance occurs when cells respond poorly to insulin signaling. This disrupts glucose regulation and is commonly associated with metabolic dysfunction.
Lactic acid
Lactic acid is produced when cells rely more heavily on glycolysis for energy production. Increased lactic acid production can occur during hypoxia or impaired oxygen utilization.
Lactate
Lactate is a metabolic byproduct generated during glycolysis. Elevated lactate levels may indicate increased reliance on anaerobic energy production.
Metabolic dysfunction
Metabolic dysfunction refers to impaired regulation of energy production and cellular metabolism. It can affect glucose handling, mitochondrial function, circulation, and stress physiology.
Metabolism
Metabolism includes all chemical processes required to maintain cellular function and energy production. It involves how the body uses oxygen, nutrients, and energy.
Microcirculation
Microcirculation refers to blood flow through the body’s smallest vessels, including capillaries. This system is critical for oxygen delivery directly to tissues.
Microvascular dysfunction
Microvascular dysfunction means small blood vessels no longer regulate blood flow properly. This can create uneven oxygen delivery and localized tissue stress.
Mitochondria
Mitochondria are structures inside cells responsible for most ATP production. They generate energy primarily through oxygen-dependent metabolism.
Nitric oxide (NO)
Nitric oxide is a signaling molecule that helps blood vessels relax and regulate circulation. Reduced nitric oxide activity can contribute to vascular dysfunction and impaired blood flow.
Oxidative phosphorylation
Oxidative phosphorylation is the mitochondria’s primary oxygen-dependent energy production pathway. It produces large amounts of ATP under normal physiological conditions.
Oxidative stress
Oxidative stress occurs when reactive oxygen species exceed the body’s antioxidant defenses. Excess oxidative stress can damage cells, blood vessels, and cellular signaling systems.
Oxygen delivery
Oxygen delivery refers to the transport of oxygen from the lungs to tissues. This depends on blood flow, hemoglobin function, vascular regulation, and microcirculation.
Parasympathetic nervous system
The parasympathetic nervous system supports recovery, repair, digestion, and energy conservation. It is often described as the body’s “rest and recovery” system.
Perfusion
Perfusion refers to blood flow reaching tissues and organs. Reduced perfusion can impair oxygen and nutrient delivery even when circulation is still present.
Physiological stress
Physiological stress refers to biological strain placed on the body. This can result from impaired oxygen delivery, metabolic imbalance, inflammation, or chronic compensation.
Redox balance
Redox balance refers to the balance between oxidation and antioxidant defense systems. Disruption of redox balance can contribute to oxidative stress and cellular dysfunction.
Sympathetic nervous system
The sympathetic nervous system activates the body’s stress response. It increases heart rate, blood pressure, alertness, and circulatory compensation during physiological stress.
Tissue hypoxia
Tissue hypoxia means specific tissues are not receiving sufficient oxygen. This may occur even when standard oxygen measurements appear normal.
Vasoconstriction
Vasoconstriction means blood vessels narrow. This can reduce blood flow to tissues and increase circulatory resistance.
Vasodilation
Vasodilation means blood vessels relax and widen. This improves blood flow, oxygen delivery, and tissue perfusion.
The information provided here is for educational purposes only and is not intended as medical advice. Some content discusses hypotheses and proposed biological mechanisms based on an integration of published research. It should not be used to diagnose, treat, cure, or prevent any medical condition. Use this information as a starting point for discussion with a qualified healthcare provider before making decisions about medications, supplements, devices, or changes to your health regimen. See full disclaimer and ai disclosure.
Carbon Monoxide and Fibrin Amyloid Structure Formation
THE CARCO STRESS MODEL: Carbon Monoxide Exposure → Peroxynitrite Formation in Capillaries → Fibrin Amyloid Formation → Microvascular Obstruction → Reduced Mitochondrial Oxygen Availability → Aerobic Energy Production Failure → Systemic Dysfunctions
How Carbon Monoxide Leads to Fibrin Amyloid Formation
Carbon monoxide displaces nitric oxide from platelets, leading to the formation of peroxynitrite. This peroxynitrite directly triggers neutrophils to release neutrophil extracellular traps NETs. They contain neutrophil DNA together with proteins including myeloperoxidase (MPO) and neutrophil elastase.
Conversion Into Abnormal Amyloid Structures
This sequence places carbon monoxide, heme-associated iron, fibrinogen, activated platelets, and MPO to interact in the same spot. This direct chemical interaction causes abnormal protein folding to a densely packed amyloid configuration.
Structural Differences From Normal Fibrin Clot
The resulting fibrinaloid structures are physically denser than ordinary physiological fibrin. Fibrin amyloid structures are not normal physiological structures produced during ordinary blood clotting. Normal clotting produces an organized fibrin network to stabilize an injured vessel.
Fibrin Amyloid Structures Resist Normal Breakdown
Resistance to Normal Fibrin Clot Removal
Studies show that persistent fibrin amyloid microclots remain after normal plasma proteins are removed. These abnormal structures are substantially more resistant to physical breakdown than ordinary fibrin clots. The structures remain in the blood circulation even though the body has mechanisms to break down ordinary clots.
Enzyme Access and Abnormally Folded Aggregates
Fibrinogen amyloid structures present the body with a fundamentally altered protein architecture. The material consists of abnormally folded fibrinogen aggregates. This dense structure is poorly accessible to the specific enzymes responsible for normal clot breakdown.
Mechanisms of Persistence
The established finding is that fibrinogen amyloid structures are unusually resistant to degradation. It remains unresolved exactly how much of this persistence results from impaired enzyme access, altered protein structure, or other physical mechanisms.

Accumulation in the Microcirculation
Ongoing Formation and Accumulation
As long as carbon monoxide exposure continues, the body remains trapped in a cycle of ongoing clot formation and incomplete clot removal. Because fibrin amyloid structures are dense and resistant to breakdown, they persist and accumulate within the blood circulation.
Microvascular Obstruction and Oxygen Delivery
When fibrin amyloid structures and activated platelets accumulate in microscopic vessels, they narrow the pathways for red blood cells. As more microvessels become obstructed, red blood cells carrying oxygen can no longer reach all capillaries.
Uneven and Insufficient Tissue Oxygen
This physical obstruction makes oxygen delivery to the surrounding tissues increasingly uneven and insufficient. Some tissue regions receive less oxygen, while others become functionally cut off from their normal oxygen supply.

Occurrence in Chronic and Neurodegenerative Diseases
Long COVID and ME/CFS
Abnormal blood clotting and fibrin amyloid microclots are observed in Long COVID and ME/CFS. Blood samples in both conditions show increased clotting activity and hyperactivated platelets. They also contain amyloid fibrinogen structures that resist normal breakdown.
Alzheimer’s Disease
Studies demonstrate the presence of specific amyloid-fibrinogen complexes in blood plasma and cerebrospinal fluid. The physical presence of these structural complexes serves as a direct biomarker for Alzheimer’s disease.
Fibromyalgia
Studies document physical changes in clotting and fibrin-related processes in people with fibromyalgia. Scientific reviews propose that fibrin amyloid microclots explain how these blood changes directly connect with fibromyalgia symptoms.
Biological Basics for Understanding the Model
How Normal Fibrin Clotting Works
Under normal conditions, fibrinogen is a soluble protein circulating in blood plasma. When a vessel is injured, the coagulation system converts fibrinogen into fibrin. Fibrin forms a branching network that reinforces the platelet clot and temporarily seals the damaged vessel.
The Normal Clot Removal Process
Once tissue repair progresses, the body breaks down the fibrin network. This normal physical process allows the temporary clot to be removed completely. The sequence goes from vessel injury and platelet activation to temporary clot formation and eventual breakdown.
Differences in Fibrin Amyloid Formation
Fibrin amyloid formation differs fundamentally from normal blood clotting. The fibrinogen adopts an abnormal, densely packed amyloid architecture. This solid structure is much more resistant to the body’s ordinary clot-removal mechanisms.
Carbon monoxide initiates direct chemical reactions where peroxynitrite triggers dense, breakdown-resistant fibrin amyloid structures, progressively obstructing blood flow and tissue oxygen delivery.
Sources
1 Rose, J. J., Wang, L., Xu, Q., McTiernan, C. F., Shiva, S., Tejero, J., & Gladwin, M. T. (2017). Carbon monoxide poisoning: Pathogenesis, management, and future directions of therapy. American Journal of Respiratory and Critical Care Medicine, 195(5), 596–606. https://doi.org/10.1164/rccm.201606-1275CI
2 Cortes-Canteli, M., Zamolodchikov, D., Ahn, H. J., Strickland, S., & Norris, E. H. (2012). Fibrinogen and altered hemostasis in Alzheimer’s disease. Journal of Alzheimer’s Disease, 32(3), 599–608. https://doi.org/10.3233/JAD-2012-120820
3 Kell, D. B., & Pretorius, E. (2026). Some potential roles of fibrin amyloid (“fibrinaloid”) microclots in fibromyalgia syndrome. International Journal of Advanced Medical and Clinical Therapeutics, 3(1), 1–38. https://ijamct.com/ijamct/article/view/24
4 Nielsen, V. G., Pretorius, E., Bester, J., Jacobsen, W. K., Boyle, P. K., & Reinhard, J. P. (2015). Carbon monoxide and iron modulate plasmatic coagulation in Alzheimer’s disease. Current Neurovascular Research, 12(1), 31–39. https://doi.org/10.2174/1567202612666150102150042
5 Machovec, K. A., Ushakumari, D. S., Welsby, I. J., & Nielsen, V. G. (2012). The procoagulant properties of purified fibrinogen concentrate are enhanced by carbon monoxide releasing molecule-2. Thrombosis Research, 129(6), 793–796. https://doi.org/10.1016/j.thromres.2011.08.005
6 Jansen, K. A., et al. (2020). Molecular packing structure of fibrin fibers resolved by X-ray scattering and molecular modeling. Soft Matter, 16(35), 8272–8283. https://doi.org/10.1039/D0SM00916D
7 Nunes, J. M., Kruger, A., Proal, A., Kell, D. B., & Pretorius, E. (2022). The occurrence of hyperactivated platelets and fibrinaloid microclots in myalgic encephalomyelitis/chronic fatigue syndrome (ME/CFS). Pharmaceuticals, 15(8), 931. https://doi.org/10.3390/ph15080931
8 Wåhlén, K., Ernberg, M., Kosek, E., Mannerkorpi, K., Gerdle, B., & Ghafouri, B. (2020). Significant correlation between plasma proteome profile and pain intensity, sensitivity, and psychological distress in women with fibromyalgia. Scientific Reports, 10, 12508. https://doi.org/10.1038/s41598-020-69422-z
9 Han, C. L., Sheng, Y. C., Wang, S. Y., et al. (2020). Serum proteome profiles revealed dysregulated proteins and mechanisms associated with fibromyalgia syndrome in women. Scientific Reports, 10, 12347. https://doi.org/10.1038/s41598-020-69271-w
10 Pretorius E, Vlok M, Venter C, Bezuidenhout JA, Laubscher GJ, Steenkamp J, Kell DB.Persistent clotting protein pathology in Long COVID/Post-Acute Sequelae of COVID-19 (PASC) is accompanied by increased levels of antiplasmin. Cardiovascular Diabetology. 2021;20:172. https://link.springer.com/article/10.1186/s12933-021-01359-7
11 Molina, F., del Moral, M. L., La Rubia, M., Blanco, S., Carmona, R., & Rus, A. (2019). Are patients with fibromyalgia in a prothrombotic state? Biological Research for Nursing, 21(2), 224–230. https://doi.org/10.1177/1099800418824716
12 Kell, D. B., Muhammed Asad Khan, Kane, B., Gregory, & Pretorius, E. (2024). Possible role of fibrinaloid microclots in postural orthostatic tachycardia syndrome (POTS): Focus on Long COVID. Journal of Personalized Medicine, 14(2), 170–170. https://doi.org/10.3390/jpm14020170
13 H. Sack Jr., G. (2019). Pathophysiology of Amyloid Fibril Formation. In Amyloid Diseases. IntechOpen. https://doi.org/10.5772/intechopen.81965 .

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